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Intron Name: Anas_platyrhynchos_platyrhynchos_1_59046933_59047684_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
59046933 - 59047684

Intron Length:
752

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTTAGTCTC

5'SS Class:
strong_major

3'SS Sequence:
TCTGTTTGTTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTAAA

U12 Branch Point Sequence:
ATGTTTTTAAAT

Flanking Amino Acid:
CTTSILACSSGVMKWRRG*K

Intron Amino Acid Position:
287

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.4
0.79
1.1
77.3
37.8

Major BPS
90.4
1
0.7
90.2
19.3

Major PPT
81.4
0.71
0.9
80.2
37.3

Minor 5ss
35.1
-1.7
2.8
45
42.9

Minor BPS
68.3
0.65
1.3
78.91
37.3

Associated Gene:

Gene:
KDM7A

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

59025945 - 59052701
26757

59025945 - 59057736
31792