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Intron Name: Anas_platyrhynchos_platyrhynchos_1_59135960_59136420_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59135960 - 59136420

Intron Length:

461

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGCGAT

U12 Branch Point Sequence:

TCTGCTGTGAGT

Flanking Amino Acid:

KLIQKYKEAMSNKPCRYFDE

Intron Amino Acid Position:

356

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

68.9

36.1

Major BPS

58.6

0.21

1.5

58.2

48.3

Major PPT

92.2

0.95

0.6

84.9

29.9

Minor 5ss

29.6

-2.3

3.4

39.6

45.9

Minor BPS

44.9

-0.3

2.3

65.81

45.8

Associated Gene:

Gene:

MKRN1

Ensembl Gene ID:

ENSAPLG00000016256

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016961

59133154 - 59153896

20743

ENSAPLT00000047163

59134695 - 59153896

19202

ENSAPLT00000029466

59134695 - 59153896

19202