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Intron Name: Anas_platyrhynchos_platyrhynchos_1_59148796_59153711_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59148796 - 59153711

Intron Length:

4916

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCGCC

5'SS Class:

major

3'SS Sequence:

TTCTGTCTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTGTTCTTAATT

Flanking Amino Acid:

GGGWTKQVTCRYFMHGVCKE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

68.2

38.6

Major BPS

0.92

0.9

86.2

29.1

Major PPT

81.6

0.71

0.8

76.5

32.3

Minor 5ss

36.2

-1.6

3.5

50.4

46.4

Minor BPS

83.4

1.13

91.18

32.6

Associated Gene:

Gene:

MKRN1

Ensembl Gene ID:

ENSAPLG00000016256

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047163

59134695 - 59153896

19202

ENSAPLT00000029466

59134695 - 59153896

19202

ENSAPLT00000016961

59133154 - 59153896

20743