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Intron Name: Anas_platyrhynchos_platyrhynchos_1_59160683_59161310_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59160683 - 59161310

Intron Length:

628

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TATTTATCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TTGTCTATATTT

Flanking Amino Acid:

RTTQVRRFLHGAYFRIQPSV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

79.6

35.4

Major BPS

88.7

0.96

0.8

36.5

Major PPT

78.7

0.65

0.9

70.7

39.8

Minor 5ss

32.1

-2

2.8

39.3

41.2

Minor BPS

54.7

0.23

1.9

76.35

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016136

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016840

59160598 - 59182718

22121

ENSAPLT00000016835

59160579 - 59183718

23140