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Intron Name: Anas_platyrhynchos_platyrhynchos_1_59161426_59162640_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

59161426 - 59162640

Intron Length:

1215

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTGTGGAT

5'SS Class:

weak_major

3'SS Sequence:

TATCTTATTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTTAT

U12 Branch Point Sequence:

TCTATCTTATTC

Flanking Amino Acid:

THGMAYPQNLSMAREVEKIV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.4

0.2

1.3

57.9

40.9

Major BPS

82.6

0.81

0.8

71.7

Major PPT

78.4

0.64

0.8

70.9

39.4

Minor 5ss

25.9

-2.8

3.6

38.1

46.9

Minor BPS

57.6

0.22

1.6

66.15

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016136

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016840

59160598 - 59182718

22121

ENSAPLT00000016835

59160579 - 59183718

23140