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Intron Name: Anas_platyrhynchos_platyrhynchos_1_59165973_59166253_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59165973 - 59166253

Intron Length:

281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCAC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTATTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TTTGTCTCATCT

Flanking Amino Acid:

EAIQQALGEARSKGITGKEL

Intron Amino Acid Position:

281

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.1

37.5

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

86.8

0.83

0.8

81.4

35.2

Minor 5ss

25.6

-2.8

3.1

31.9

42.9

Minor BPS

55.8

0.26

1.9

79.56

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016136

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016835

59160579 - 59183718

23140

ENSAPLT00000016840

59160598 - 59182718

22121