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Intron Name: Anas_platyrhynchos_platyrhynchos_1_59167512_59168792_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59167512 - 59168792

Intron Length:

1281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTGAGTCCC

5'SS Class:

major

3'SS Sequence:

CTTCCCTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

CTTTTTTTACTT

Flanking Amino Acid:

RQEDTTPPQPVVIGGINVDF

Intron Amino Acid Position:

352

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

59.9

39.3

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

74.1

0.54

74.2

28.3

Minor 5ss

32.2

-2

2.9

42.7

37.7

Minor BPS

63.2

0.49

1.6

78.3

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016136

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016835

59160579 - 59183718

23140

ENSAPLT00000016840

59160598 - 59182718

22121