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Intron Name: Anas_platyrhynchos_platyrhynchos_1_59175848_59177558_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

59175848 - 59177558

Intron Length:

1711

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTATGCATG

5'SS Class:

weak_major

3'SS Sequence:

GGATTTGCACTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GACTCAG

U12 Branch Point Sequence:

GTGTCCTGGATT

Flanking Amino Acid:

DIHQQITEQYVSQFKEKLCR

Intron Amino Acid Position:

469

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

67.4

43.5

Major BPS

48.2

-0.1

1.6

57.3

41.7

Major PPT

56.2

0.14

1.1

48.5

44.7

Minor 5ss

55.4

0.18

2.4

70.4

40.2

Minor BPS

63.8

0.52

1.5

76.54

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016136

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016835

59160579 - 59183718

23140