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Intron Name: Anas_platyrhynchos_platyrhynchos_1_59178586_59179255_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59178586 - 59179255

Intron Length:

670

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGAAC

5'SS Class:

major

3'SS Sequence:

CTGCTGCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAA

U12 Branch Point Sequence:

TTAAAGTTATGC

Flanking Amino Acid:

NRTLGNPLPAELPSRLEDVI

Intron Amino Acid Position:

553

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.54

1.1

67.6

37.3

Major BPS

0.7

0.9

79.6

29.1

Major PPT

68.2

0.41

0.9

61.5

34.9

Minor 5ss

38.7

-1.3

3.1

51.2

45.6

Minor BPS

-0.8

2.4

52.85

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016136

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016835

59160579 - 59183718

23140

ENSAPLT00000016840

59160598 - 59182718

22121