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Intron Name: Anas_platyrhynchos_platyrhynchos_1_59179423_59179893_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59179423 - 59179893

Intron Length:

471

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCCACACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTAAT

U12 Branch Point Sequence:

TTCCCACTAATG

Flanking Amino Acid:

ISLRPAAHEQPAAASLCATH

Intron Amino Acid Position:

609

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

75.8

33.8

Major BPS

74.4

0.61

0.9

73.6

28.6

Major PPT

0.56

0.8

69.5

30.1

Minor 5ss

29.5

-2.3

3.4

38.8

46.5

Minor BPS

48.2

-0.2

58.92

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016136

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016840

59160598 - 59182718

22121

ENSAPLT00000016835

59160579 - 59183718

23140