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Intron Name: Anas_platyrhynchos_platyrhynchos_1_59179983_59182522_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59179983 - 59182522

Intron Length:

2540

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCTCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAG

U12 Branch Point Sequence:

TGTCTCTCCACA

Flanking Amino Acid:

EIVNVSGAGDSLLAGLLAGM

Intron Amino Acid Position:

638

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

Major BPS

47.4

-0.1

1.6

54.7

43.1

Major PPT

78.5

0.64

0.8

72.6

32.3

Minor 5ss

53.1

0.1

2.3

69.7

41.2

Minor BPS

-0

65.67

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016136

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016835

59160579 - 59183718

23140

ENSAPLT00000016840

59160598 - 59182718

22121