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Intron Name: Anas_platyrhynchos_platyrhynchos_1_59189925_59190572_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59189925 - 59190572

Intron Length:

648

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCCAT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCGCTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

GTGGAAATAACC

Flanking Amino Acid:

PRLKELPVEEVLVVDLVNNR

Intron Amino Acid Position:

847

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

0.9

38.4

Major BPS

0.62

1.4

85.7

34.9

Major PPT

75.5

0.57

0.8

72.4

32.3

Minor 5ss

34.1

-1.8

3.2

46.7

48.6

Minor BPS

43.2

-0.5

54.57

42.6

Associated Gene:

Gene:

DENND2A

Ensembl Gene ID:

ENSAPLG00000015883

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016601

59186719 - 59237779

51061