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Intron Name: Anas_platyrhynchos_platyrhynchos_1_59217362_59219074_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

59217362 - 59219074

Intron Length:

1713

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGGTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTGAAT

U12 Branch Point Sequence:

TGGCAGTGAATG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

77.7

30.1

Major BPS

50.6

0.02

1.5

61.4

43.2

Major PPT

78.4

0.64

0.9

72.9

37.4

Minor 5ss

27.6

-2.6

3.3

39.2

46.2

Minor BPS

-0.8

2.2

43.61

41.7

Associated Gene:

Gene:

DENND2A

Ensembl Gene ID:

ENSAPLG00000015883

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016601

59186719 - 59237779

51061