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Intron Name: Anas_platyrhynchos_platyrhynchos_1_59241995_59243982_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
59241995 - 59243982

Intron Length:
1988

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTACGCACT

5'SS Class:
major

3'SS Sequence:
GCCTGTCTTCCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GGCTCAG

U12 Branch Point Sequence:
GTTGGCTCAGCT

Flanking Amino Acid:
KMGMDMLLKMIFVDNFVHAD

Intron Amino Acid Position:
346

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.7
0.56
1.1
68.2
42.6

Major BPS
45.3
-0.3
1.7
51.1
46.3

Major PPT
74.8
0.56
0.9
64.8
41.3

Minor 5ss
41.1
-1
3.1
55.4
43.8

Minor BPS
46
-0.2
2.2
68.99
47.4

Associated Gene:

Gene:
ADCK2

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

59238180 - 59247354
9175