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Intron Name: Anas_platyrhynchos_platyrhynchos_1_59257128_59257689_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59257128 - 59257689

Intron Length:

562

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGAGGT

5'SS Class:

strong_major

3'SS Sequence:

CTAACGTGCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTTTTCTAACG

Flanking Amino Acid:

KVMENEEAHSAQNRQGVLVS

Intron Amino Acid Position:

375

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

40.8

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

60.8

0.24

57.3

42.9

Minor 5ss

31.1

-2.2

3.6

47.6

47.8

Minor BPS

66.4

0.38

1.7

75.41

36.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016818

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047660

59250942 - 59260493

9552