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Intron Name: Anas_platyrhynchos_platyrhynchos_1_59275704_59276562_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59275704 - 59276562

Intron Length:

859

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAGT

5'SS Class:

strong_major

3'SS Sequence:

TTGCTTGTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAGAA

U12 Branch Point Sequence:

TTTAGAATAACT

Flanking Amino Acid:

KRDERPLFPQILASIELLAR

Intron Amino Acid Position:

698

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.8

78.6

37.3

Major BPS

0.5

39.8

Major PPT

78.4

0.64

0.9

77.1

37.1

Minor 5ss

28.5

-2.5

3.1

39.7

45.9

Minor BPS

48.9

-0

2.3

79.32

42.1

Associated Gene:

Gene:

BRAF

Ensembl Gene ID:

ENSAPLG00000015187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033696

59274021 - 59329786

55766

ENSAPLT00000015915

59269296 - 59329786

60491