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Intron Name: Anas_platyrhynchos_platyrhynchos_1_59276698_59279438_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

59276698 - 59279438

Intron Length:

2741

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAAGA

5'SS Class:

strong_major

3'SS Sequence:

TCCTAAAATAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TTTTCCTAAAAT

Flanking Amino Acid:

PYSNINNRDQIIFMVGRGYL

Intron Amino Acid Position:

653

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

74.1

36.4

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

54.8

0.11

1.1

53.5

38.6

Minor 5ss

32.2

-2

40.7

45.1

Minor BPS

75.3

0.87

1.7

93.4

34.6

Associated Gene:

Gene:

BRAF

Ensembl Gene ID:

ENSAPLG00000015187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033696

59274021 - 59329786

55766

ENSAPLT00000015915

59269296 - 59329786

60491