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Intron Name: Anas_platyrhynchos_platyrhynchos_1_59280430_59281027_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

59280430 - 59281027

Intron Length:

598

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

ATTTCCCACTTAG|A

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

TTTCCCTTAACA

Flanking Amino Acid:

SIIHRDLKSNNIFLHEDLTV

Intron Amino Acid Position:

569

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.7

0.06

1.2

57.8

41.9

Major BPS

0.52

1.1

77.7

35.3

Major PPT

69.5

0.44

0.9

67.7

33.3

Minor 5ss

96.3

1.56

0.7

91.7

17.5

Minor BPS

89.8

1.24

0.9

93.36

24.6

Associated Gene:

Gene:

BRAF

Ensembl Gene ID:

ENSAPLG00000015187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033696

59274021 - 59329786

55766

ENSAPLT00000015915

59269296 - 59329786

60491