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Intron Name: Anas_platyrhynchos_platyrhynchos_1_59281075_59282585_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59281075 - 59282585

Intron Length:

1511

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAGTCTC

5'SS Class:

major

3'SS Sequence:

TGTTCCTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTAAT

U12 Branch Point Sequence:

TAACATCTAACC

Flanking Amino Acid:

DIARQTAQGMDYLHAKSIIH

Intron Amino Acid Position:

553

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

69.9

41.1

Major BPS

85.7

0.89

0.8

22.2

Major PPT

87.4

0.84

0.7

84.9

29.9

Minor 5ss

40.1

-1.1

50.3

40.1

Minor BPS

48.1

-0.1

1.8

60.25

37.9

Associated Gene:

Gene:

BRAF

Ensembl Gene ID:

ENSAPLG00000015187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033696

59274021 - 59329786

55766

ENSAPLT00000015915

59269296 - 59329786

60491