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Intron Name: Anas_platyrhynchos_platyrhynchos_1_59287156_59289852_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59287156 - 59289852

Intron Length:

2697

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGTTGGG

5'SS Class:

major

3'SS Sequence:

TTCTGAAATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

TGTTTCTGAAAT

Flanking Amino Acid:

FDFEPGPVFRGSTAGLSATP

Intron Amino Acid Position:

381

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

1.1

59.9

45.1

Major BPS

82.1

0.8

71.6

36.4

Major PPT

66.9

0.38

64.2

40.8

Minor 5ss

30.8

-2.2

3.4

40.6

45.6

Minor BPS

67.1

0.62

1.5

83.04

37.3

Associated Gene:

Gene:

BRAF

Ensembl Gene ID:

ENSAPLG00000015187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015915

59269296 - 59329786

60491