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Intron Name: Anas_platyrhynchos_platyrhynchos_1_59301490_59302594_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59301490 - 59302594

Intron Length:

1105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

TCTTGCCTCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

TCTTGCCTCACA

Flanking Amino Acid:

PLMCVNYDQLDLLFVSKFFE

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

80.7

33.7

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

78.8

0.65

0.8

72.3

32.5

Minor 5ss

38.7

-1.3

2.8

47.9

41.8

Minor BPS

47.3

-0.2

2.4

67.55

44.9

Associated Gene:

Gene:

BRAF

Ensembl Gene ID:

ENSAPLG00000015187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015915

59269296 - 59329786

60491

ENSAPLT00000033696

59274021 - 59329786

55766