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Intron Name: Anas_platyrhynchos_platyrhynchos_1_59302744_59303983_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59302744 - 59303983

Intron Length:

1240

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTATGTACC

5'SS Class:

major

3'SS Sequence:

TTTTACAATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTTTTACAATT

Flanking Amino Acid:

ENVPLTTHNFVRKTFFTLAF

Intron Amino Acid Position:

186

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.7

0.44

1.1

66.2

37.2

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

0.54

0.9

72.2

37.8

Minor 5ss

45.7

-0.5

2.4

61.3

37.1

Minor BPS

56.7

0.29

1.8

80.49

35.6

Associated Gene:

Gene:

BRAF

Ensembl Gene ID:

ENSAPLG00000015187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033696

59274021 - 59329786

55766

ENSAPLT00000015915

59269296 - 59329786

60491