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Intron Name: Anas_platyrhynchos_platyrhynchos_1_59304087_59304813_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59304087 - 59304813

Intron Length:

727

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGGTTT

5'SS Class:

major

3'SS Sequence:

ATTTGCACTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

CTTATTTGCACT

Flanking Amino Acid:

ECCAVYRIQDGEKKPIGWDT

Intron Amino Acid Position:

151

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

72.1

39.9

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

76.1

0.59

0.9

71.7

38.7

Minor 5ss

48.3

-0.1

3.1

64.2

47.3

Minor BPS

47.3

-0.1

1.9

68.53

42.7

Associated Gene:

Gene:

BRAF

Ensembl Gene ID:

ENSAPLG00000015187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033696

59274021 - 59329786

55766

ENSAPLT00000015915

59269296 - 59329786

60491