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Intron Name: Anas_platyrhynchos_platyrhynchos_1_59304918_59320036_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59304918 - 59320036

Intron Length:

15119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

ATTTGCCATCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTGTTTTAATC

Flanking Amino Acid:

VFLPNKQRTVVPARCGVTVR

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

75.9

35.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.43

60.2

41.3

Minor 5ss

33.7

-1.9

2.9

Minor BPS

64.2

0.42

1.4

68.66

38.1

Associated Gene:

Gene:

BRAF

Ensembl Gene ID:

ENSAPLG00000015187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033696

59274021 - 59329786

55766

ENSAPLT00000015915

59269296 - 59329786

60491