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Intron Name: Anas_platyrhynchos_platyrhynchos_1_59320301_59329702_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59320301 - 59329702

Intron Length:

9402

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TCTTCCTTCACA

Flanking Amino Acid:

EHNPPSIYLEAYEEYTSKLD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.7

1.1

0.7

87.9

29.3

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

84.6

0.78

0.7

79.5

Minor 5ss

43.8

-0.7

2.8

57.8

46.8

Minor BPS

75.6

0.8

1.7

83.03

38.2

Associated Gene:

Gene:

BRAF

Ensembl Gene ID:

ENSAPLG00000015187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033696

59274021 - 59329786

55766

ENSAPLT00000015915

59269296 - 59329786

60491