Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_59624819_59626523_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59624819 - 59626523

Intron Length:

1705

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAGT

5'SS Class:

strong_major

3'SS Sequence:

TATCTGTACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAATAAT

U12 Branch Point Sequence:

TTATCTGTACAC

Flanking Amino Acid:

ASRCILQLPEGAEGSFGIDN

Intron Amino Acid Position:

380

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.6

33.3

Major BPS

62.3

0.31

1.3

64.3

39.7

Major PPT

70.9

0.47

65.1

40.1

Minor 5ss

35.2

-1.7

49.5

46.3

Minor BPS

46.6

-0.2

2.3

41.7

Associated Gene:

Gene:

AGK

Ensembl Gene ID:

ENSAPLG00000014517

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015192

59597547 - 59627068

29522