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Intron Name: Anas_platyrhynchos_platyrhynchos_1_59663397_59664179_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59663397 - 59664179

Intron Length:

783

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTGTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTTAC

U12 Branch Point Sequence:

CTTGCATTTACT

Flanking Amino Acid:

TVVGSLVLERSMNRVQLLGR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

78.2

36.4

Major BPS

66.4

0.41

37.6

Major PPT

82.9

0.74

0.9

80.2

37.3

Minor 5ss

38.5

-1.3

2.8

50.4

39.2

Minor BPS

54.6

0.23

2.1

77.25

44.9

Associated Gene:

Gene:

SSBP1

Ensembl Gene ID:

ENSAPLG00000013244

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045574

59662902 - 59666073

3172

ENSAPLT00000013795

59662902 - 59667359

4458