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Intron Name: Anas_platyrhynchos_platyrhynchos_1_59712903_59727201_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
59712903 - 59727201

Intron Length:
14299

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAGTACTG

5'SS Class:
major

3'SS Sequence:
CCTTCCCTGGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TAAACAT

U12 Branch Point Sequence:
CTGACCTAAACA

Flanking Amino Acid:
HISNDDNFNEGDLENEEWCL

Intron Amino Acid Position:
303

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.6
0.46
1.1
59.2
45.5

Major BPS
63.2
0.33
1.1
69.6
35.7

Major PPT
73.1
0.52
0.9
69
31.5

Minor 5ss
34.3
-1.8
3.4
47.5
47.9

Minor BPS
59.6
0.3
1.8
67.7
44.7

Associated Gene:

Gene:
CREB3L2

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

59673050 - 59744630
71581