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Intron Name: Anas_platyrhynchos_platyrhynchos_1_59728767_59730582_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
59728767 - 59730582

Intron Length:
1816

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTCTGTTAA

5'SS Class:
major

3'SS Sequence:
TCTTGCCATTCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTACAT

U12 Branch Point Sequence:
CAAATCTTACAT

Flanking Amino Acid:
DQFLNLSSKEAVDPLHLPPT

Intron Amino Acid Position:
388

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.1
0.57
1.3
72.9
34.5

Major BPS
70.4
0.51
1.1
78.7
33.6

Major PPT
77.2
0.61
0.9
74.2
35.6

Minor 5ss
41
-1
2.6
49.5
46.8

Minor BPS
47.3
-0.1
1.7
59.65
43.2

Associated Gene:

Gene:
CREB3L2

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

59673050 - 59744630
71581