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Intron Name: Anas_platyrhynchos_platyrhynchos_1_59832428_59842757_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59832428 - 59842757

Intron Length:

10330

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAGGTGTT

5'SS Class:

major

3'SS Sequence:

TTTTTTTTAATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAATTAT

U12 Branch Point Sequence:

TTTTTTTTAATA

Flanking Amino Acid:

KEPRAALEWTENAVNGEHLW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.3

0.41

1.2

69.5

41.3

Major BPS

64.6

0.36

1.1

55.7

39.9

Major PPT

86.6

0.82

0.7

85.3

27.9

Minor 5ss

40.1

-1.1

3.7

44.2

Minor BPS

82.2

1.01

0.9

86.33

25.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012073

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012626

59827924 - 59874579

46656