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Intron Name: Anas_platyrhynchos_platyrhynchos_1_59842854_59846107_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59842854 - 59846107

Intron Length:

3254

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTGAGTTAT

5'SS Class:

major

3'SS Sequence:

TTTCCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCACAT

U12 Branch Point Sequence:

ATCCACATACTT

Flanking Amino Acid:

GEESCQVKFSKSALRRKCAA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

74.2

32.2

Major BPS

65.1

0.38

1.1

71.2

35.2

Major PPT

89.6

0.89

0.6

84.7

22.9

Minor 5ss

38.6

-1.3

54.7

43.6

Minor BPS

-0.3

61.78

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012073

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012626

59827924 - 59874579

46656