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Intron Name: Anas_platyrhynchos_platyrhynchos_1_60046963_60062339_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60046963 - 60062339

Intron Length:

15377

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTCC

5'SS Class:

strong_major

3'SS Sequence:

GTTATCTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TTATTGTTATCT

Flanking Amino Acid:

CGKLTKPKPQESKKKKKEGK

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

78.2

30.3

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

83.1

0.75

0.9

76.4

37.6

Minor 5ss

40.8

-1

2.8

53.7

43.5

Minor BPS

54.8

0.23

2.3

80.16

41.9

Associated Gene:

Gene:

PTN

Ensembl Gene ID:

ENSAPLG00000011788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041201

60043857 - 60062411

18555

ENSAPLT00000034223

60002377 - 60062411

60035