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Intron Name: Anas_platyrhynchos_platyrhynchos_1_60046963_60186460_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

60046963 - 60186460

Intron Length:

139498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTCC

5'SS Class:

strong_major

3'SS Sequence:

ATTAGACATTAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TGTCTTTGAAAT

Flanking Amino Acid:

CGKLTKPKPQESKNTGM*

Intron Amino Acid Position:

170

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

78.2

30.3

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

54.1

0.09

1.2

55.1

43.7

Minor 5ss

40.8

-1

2.8

53.7

43.5

Minor BPS

54.3

0.21

1.5

72.27

Associated Gene:

Gene:

PTN

Ensembl Gene ID:

ENSAPLG00000011788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012270

60043857 - 60186483

142627