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Intron Name: Anas_platyrhynchos_platyrhynchos_1_60135021_60135117_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

60135021 - 60135117

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TCT|GCAGGATTA

5'SS Class:

weak_major

3'SS Sequence:

GATGGCTCTGGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

TTCCACTGAAAA

Flanking Amino Acid:

MFSFLSSSPYKTVEVVF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.6

0.09

1.5

53.8

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

48.2

-0.1

1.7

43.6

Minor 5ss

32.7

-2

4.4

56.1

48.1

Minor BPS

49.9

-0

1.8

64.61

40.8

Associated Gene:

Gene:

CHRM2

Ensembl Gene ID:

ENSAPLG00000021598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035007

60130812 - 60135138

4327