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Intron Name: Anas_platyrhynchos_platyrhynchos_1_6013621_6054732_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6013621 - 6054732

Intron Length:

41112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

TTATGTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

ATCCTCATACCT

Flanking Amino Acid:

SPNHLYLVMQLVSGGELFDR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

79.2

33.9

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

0.79

0.9

77.1

41.8

Minor 5ss

40.9

-1

2.8

58.9

39.3

Minor BPS

48.2

-0

1.9

68.26

42.5

Associated Gene:

Gene:

CAMK1D

Ensembl Gene ID:

ENSAPLG00000005323

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046776

5962032 - 6093404

131373

ENSAPLT00000031574

5895631 - 6093404

197774

ENSAPLT00000005499

5892341 - 6093404

201064