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Intron Name: Anas_platyrhynchos_platyrhynchos_1_60405121_60494005_R

Intron Information:

Intron Rank:

154656

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

60405121 - 60494005

Intron Length:

88885

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATATCA

5'SS Class:

strong_major

3'SS Sequence:

TACACTTAAATAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTTAA

U12 Branch Point Sequence:

TTACACTTAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

73.3

31.6

Major BPS

79.5

0.73

0.9

36.9

Major PPT

59.3

0.21

55.2

38.9

Minor 5ss

38.3

-1.3

49.1

46.6

Minor BPS

65.3

0.56

1.6

81.5

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030786

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030355

60404737 - 60494579

89843