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Intron Name: Anas_platyrhynchos_platyrhynchos_1_6059383_6068077_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6059383 - 6068077

Intron Length:

8695

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TGGTCTTGTAAT

Flanking Amino Acid:

STACGTPGYVAPEVLAQKPY

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

71.6

38.4

Major BPS

84.4

0.85

1.1

34.5

Major PPT

93.6

0.98

0.7

92.3

26.6

Minor 5ss

32.3

-2

3.5

44.3

45.4

Minor BPS

47.6

-0.1

1.9

66.73

43.8

Associated Gene:

Gene:

CAMK1D

Ensembl Gene ID:

ENSAPLG00000005323

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031574

5895631 - 6093404

197774

ENSAPLT00000005499

5892341 - 6093404

201064

ENSAPLT00000046776

5962032 - 6093404

131373