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Intron Name: Anas_platyrhynchos_platyrhynchos_1_60652272_60654916_F

Intron Information:

Intron Rank:

145385

Intron Class:

major

Intron Phase:

Intron Coordinates:

60652272 - 60654916

Intron Length:

2645

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTTT

U12 Branch Point Sequence:

TTCCCTTTAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

81.6

33.2

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

77.8

0.63

78.5

27.6

Minor 5ss

43.4

-0.7

3.2

57.2

46.9

Minor BPS

0.3

1.5

65.96

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028377

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030565

60651914 - 60656617

4704

ENSAPLT00000026884

60651914 - 60655593

3680