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Intron Name: Anas_platyrhynchos_platyrhynchos_1_6068154_6077263_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6068154 - 6077263

Intron Length:

9110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTATC

5'SS Class:

major

3'SS Sequence:

TGTTCTGCATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTCAC

U12 Branch Point Sequence:

TTGTTCTGCATT

Flanking Amino Acid:

CWSIGVIAYILLCGYPPFYD

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.1

74.7

35.4

Major BPS

57.2

0.18

1.4

63.1

44.5

Major PPT

68.1

0.41

67.5

Minor 5ss

37.8

-1.4

55.7

41.6

Minor BPS

53.5

0.19

1.9

75.93

41.4

Associated Gene:

Gene:

CAMK1D

Ensembl Gene ID:

ENSAPLG00000005323

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046776

5962032 - 6093404

131373

ENSAPLT00000031574

5895631 - 6093404

197774

ENSAPLT00000005499

5892341 - 6093404

201064