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Intron Name: Anas_platyrhynchos_platyrhynchos_1_60790638_60790690_R

Intron Information:

Intron Rank:

149916

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

60790638 - 60790690

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-TG

5'SS Sequence:

TGT|GTTTTTTTT

5'SS Class:

weak_minor

3'SS Sequence:

TTTGTTTTGTTTG|T

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

TTTTTGT

U12 Branch Point Sequence:

TTTGTTTTGTTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

48.8

-0

1.2

58.4

40.9

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

43.9

-0.3

3.2

73.5

41.8

Minor 5ss

52.3

0.08

2.4

69.2

41.3

Minor BPS

42.5

-0.5

3.4

73.17

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023198

60789611 - 60791623

2013