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Intron Name: Anas_platyrhynchos_platyrhynchos_1_6089532_6090000_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6089532 - 6090000

Intron Length:

469

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTGAC

5'SS Class:

major

3'SS Sequence:

TTTTTCCCCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTCTTTCATT

Flanking Amino Acid:

RKNFAKSKWRQAFNATAVVR

Intron Amino Acid Position:

278

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

69.5

35.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

85.3

0.79

0.7

30.8

Minor 5ss

34.3

-1.8

3.2

40.1

Minor BPS

73.9

0.83

1.6

91.31

32.6

Associated Gene:

Gene:

CAMK1D

Ensembl Gene ID:

ENSAPLG00000005323

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046776

5962032 - 6093404

131373

ENSAPLT00000031574

5895631 - 6093404

197774

ENSAPLT00000005499

5892341 - 6093404

201064