Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_61034814_61040253_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61034814 - 61040253

Intron Length:

5440

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGAC

5'SS Class:

strong_major

3'SS Sequence:

TGTGTGTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAACTAT

U12 Branch Point Sequence:

TATGGCTCATTT

Flanking Amino Acid:

RQITEPTSSSRHNSFRRHLP

Intron Amino Acid Position:

170

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.5

32.8

Major BPS

54.3

0.11

1.3

53.1

42.3

Major PPT

71.4

0.48

1.1

65.2

45.5

Minor 5ss

29.5

-2.3

3.5

40.1

46.3

Minor BPS

44.5

-0.3

2.2

65.02

45.8

Associated Gene:

Gene:

SYT10

Ensembl Gene ID:

ENSAPLG00000004558

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004687

61021822 - 61056450

34629