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Intron Name: Anas_platyrhynchos_platyrhynchos_1_61040819_61052361_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61040819 - 61052361

Intron Length:

11543

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

TTTTCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TGATTATTATTT

Flanking Amino Acid:

VWKDIHCATTESIDLGEIMF

Intron Amino Acid Position:

359

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

81.1

32.8

Major BPS

84.7

0.86

74.3

40.7

Major PPT

96.8

1.05

0.5

96.1

13.2

Minor 5ss

39.6

-1.2

2.9

41.2

Minor BPS

50.8

0.1

1.8

70.46

40.5

Associated Gene:

Gene:

SYT10

Ensembl Gene ID:

ENSAPLG00000004558

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004687

61021822 - 61056450

34629