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Intron Name: Anas_platyrhynchos_platyrhynchos_1_61234223_61238795_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61234223 - 61238795

Intron Length:

4573

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCATA

5'SS Class:

strong_major

3'SS Sequence:

TTATACTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

TTTTCTTCAATT

Flanking Amino Acid:

EQVTINGSQLGSPEGEMTLE

Intron Amino Acid Position:

341

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

38.6

Major BPS

78.2

0.7

79.9

32.6

Major PPT

72.7

0.51

1.1

76.1

37.6

Minor 5ss

42.5

-0.8

2.9

49.4

46.6

Minor BPS

77.2

0.93

1.4

92.06

30.7

Associated Gene:

Gene:

PKP2

Ensembl Gene ID:

ENSAPLG00000004755

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004900

61223005 - 61267779

44775