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Intron Name: Anas_platyrhynchos_platyrhynchos_1_61259912_61260510_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61259912 - 61260510

Intron Length:

599

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGGCAG

5'SS Class:

major

3'SS Sequence:

TACGTTACAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

TGTACGTTACAA

Flanking Amino Acid:

LQNLTAGTGPMPFAVAQTVV

Intron Amino Acid Position:

668

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.9

0.42

1.1

54.6

44.2

Major BPS

75.9

0.64

66.1

40.5

Major PPT

0.34

59.4

40.3

Minor 5ss

32.3

-2

3.3

44.1

44.4

Minor BPS

45.6

-0.3

2.3

62.22

43.5

Associated Gene:

Gene:

PKP2

Ensembl Gene ID:

ENSAPLG00000004755

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004900

61223005 - 61267779

44775