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Intron Name: Anas_platyrhynchos_platyrhynchos_1_61302130_61302634_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

61302130 - 61302634

Intron Length:

505

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGT|GTAGGGAGC

5'SS Class:

weak_major

3'SS Sequence:

CGCGGTCGCGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTCCAC

U12 Branch Point Sequence:

CTCTCCACGAGC

Flanking Amino Acid:

LLHTVDRKSAVSAGLLAAQC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.19

1.2

53.8

40.3

Major BPS

54.8

0.12

1.3

66.4

39.9

Major PPT

43.9

-0.3

1.7

41.4

38.4

Minor 5ss

33.2

-1.9

3.5

42.8

44.6

Minor BPS

43.7

-0.5

2.1

54.74

43.7

Associated Gene:

Gene:

YARS2

Ensembl Gene ID:

ENSAPLG00000004982

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024280

61302029 - 61307709

5681

ENSAPLT00000020808

61302029 - 61307709

5681