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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_61314230_61315255_R

Intron Information:

Intron Rank:
19
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
61314230 - 61315255
Intron Length:
1026

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTATTAAAA
5'SS Class:
major
3'SS Sequence:
TTTCCGTGTGCAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTCATAA
U12 Branch Point Sequence:
CCCTTCATAACT
Flanking Amino Acid:
RRKEAADMLKALQRASQIIA
Intron Amino Acid Position:
720

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
74.5
0.58
1
71.5
33.3
Major BPS
65
0.37
1
61.3
37
Major PPT
77.7
0.62
1
72.7
37.5
Minor 5ss
38.9
-1.2
2.8
48.9
46.9
Minor BPS
59.3
0.37
1.7
71.76
45.4

Associated Gene:

Gene:
DNM1L
Ensembl Gene ID:
ENSAPLG00000005012
Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000036207
61314173 - 61349472
35300
ENSAPLT00000029240
61314173 - 61349472
35300
ENSAPLT00000027430
61314173 - 61349472
35300