About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_61318479_61320855_R

Intron Information:

Intron Rank:
16
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
61318479 - 61320855
Intron Length:
2377

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTCTGTCTT
5'SS Class:
major
3'SS Sequence:
GTTGTTTGTGCAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTTAAC
U12 Branch Point Sequence:
TTTTTCTTTACT
Flanking Amino Acid:
TAASAEADGKAAPAAGDVSQ
Intron Amino Acid Position:
572

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
74.2
0.57
1.3
74.4
41.9
Major BPS
89.7
0.98
0.7
89.9
20
Major PPT
77.9
0.63
1
72.9
42.2
Minor 5ss
41.7
-0.9
2.9
59.1
45.3
Minor BPS
79.9
1.02
1.5
95.83
29.9

Associated Gene:

Gene:
DNM1L
Ensembl Gene ID:
ENSAPLG00000005012
Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000027430
61314173 - 61349472
35300
ENSAPLT00000005244
61314614 - 61349472
34859
ENSAPLT00000036207
61314173 - 61349472
35300