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Intron Name: Anas_platyrhynchos_platyrhynchos_1_61410137_61411311_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61410137 - 61411311

Intron Length:

1175

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TGTTTGTAAATC

Flanking Amino Acid:

RRHHCRACGHVVCWKCSDYK

Intron Amino Acid Position:

672

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

77.1

31.3

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

82.1

0.72

86.9

31.1

Minor 5ss

35.4

-1.7

3.2

46.1

42.2

Minor BPS

48.6

-0.1

2.3

40.4

Associated Gene:

Gene:

FGD4

Ensembl Gene ID:

ENSAPLG00000011676

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034165

61408749 - 61503150

94402

ENSAPLT00000027324

61408749 - 61520984

112236

ENSAPLT00000012228

61408749 - 61461992

53244

ENSAPLT00000048075

61408749 - 61472192

63444