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Intron Name: Anas_platyrhynchos_platyrhynchos_1_61416675_61417276_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

61416675 - 61417276

Intron Length:

602

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAATGGT

5'SS Class:

major

3'SS Sequence:

TTTCGCTGAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

ATTTAATAAACT

Flanking Amino Acid:

SHSNSAIRKMENLKKLLEIY

Intron Amino Acid Position:

481

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

71.2

38.8

Major BPS

90.7

1.01

0.7

19.9

Major PPT

58.4

0.19

1.2

60.4

39.5

Minor 5ss

33.9

-1.8

3.4

46.4

44.2

Minor BPS

0.24

2.1

80.92

40.2

Associated Gene:

Gene:

FGD4

Ensembl Gene ID:

ENSAPLG00000011676

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048075

61408749 - 61472192

63444

ENSAPLT00000034165

61408749 - 61503150

94402

ENSAPLT00000027324

61408749 - 61520984

112236

ENSAPLT00000012228

61408749 - 61461992

53244